Triticum urartu vs Triticum aestivum ATAC Results

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Triticum urartu (Triticum urartu, ASM34745v1) and Triticum aestivum (Triticum aestivum, IWGSC1+popseq) were aligned using the ATAC alignment algorithm (http://seqanswers.com/wiki/ATAC) in Ensembl Plants release 79. Triticum urartu was used as the reference species.

Results

Number of alignment blocks: 1,881,817

Genome coverage (bp) Coding exon coverage (bp)
Triticum urartu

Uncovered: 2,625,761,720 out of 3,747,163,292
Covered: 1,121,401,572 out of 3,747,163,292

Uncovered: 10,580,517 out of 36,194,921
Matches: 25,431,381 out of 36,194,921
Mismatches: 183,023 out of 36,194,921
Insertions: 0 out of 36,194,921

Triticum aestivum

Uncovered: 5,257,113,864 out of 6,378,515,436
Covered: 1,121,401,572 out of 6,378,515,436

Uncovered: 67,457,840 out of 87,732,694
Matches: 20,162,505 out of 87,732,694
Mismatches: 112,349 out of 87,732,694
Insertions: 0 out of 87,732,694

Configuration parameters

No configuration parameters are available.