Hordeum vulgare vs Triticum aestivum ATAC Results

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Hordeum vulgare (Hordeum vulgare, ASM32608v1) and Triticum aestivum (Triticum aestivum, IWGSC1+popseq) were aligned using the ATAC alignment algorithm (http://seqanswers.com/wiki/ATAC) in Ensembl Plants release 79. Hordeum vulgare was used as the reference species.

Results

Number of alignment blocks: 1,682,714

Genome coverage (bp) Coding exon coverage (bp)
Hordeum vulgare

Uncovered: 3,963,887,239 out of 4,045,300,851
Covered: 81,413,612 out of 4,045,300,851

Uncovered: 5,197,621 out of 27,753,036
Matches: 21,508,126 out of 27,753,036
Mismatches: 1,047,289 out of 27,753,036
Insertions: 0 out of 27,753,036

Triticum aestivum

Uncovered: 6,214,162,489 out of 6,378,515,436
Covered: 164,352,947 out of 6,378,515,436

Uncovered: 31,819,389 out of 87,732,694
Matches: 53,569,628 out of 87,732,694
Mismatches: 2,343,677 out of 87,732,694
Insertions: 0 out of 87,732,694

Configuration parameters

No configuration parameters are available.